PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do009343.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 589aa    MW: 64216.6 Da    PI: 6.7662
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do009343.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-10245272734
                 HHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeek 34 
                 err+++NReAAr+sR+RKka++++Le+ 
  Do009343.1 245 ERRLAQNREAARKSRLRKKAYVQQLETS 272
                 8************************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.1E-5239297IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-7244287No hitNo description
PROSITE profilePS502178.519245285IPR004827Basic-leucine zipper domain
PfamPF001705.6E-7245273IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.1E-7245288No hitNo description
PROSITE patternPS000360246261IPR004827Basic-leucine zipper domain
PfamPF141449.1E-30360435IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 589 aa     Download sequence    Send to blast
MVHGEESSWR MERAALPLNQ ALAYGVQAHH TAAAPPPSCF LDFQPAAAAA AYFGFGELEE  60
ALIHGGGGGA SASAGVDPGV IIKGDVATAQ TKTAAAGYIA GGGSGRPPTL EIFPSWPMRH  120
QQQLHSGNSQ SVGSTTDSSS AQNTMSQMEL VSPASPAPRQ EVMMVTTDDY SYKPGLASAP  180
AAAAPPPSFQ QQHHHPLPLH LHGGGDHDKR KQGSTRKDGK LADAKVGYLL LLLLPDSITV  240
PAFTERRLAQ NREAARKSRL RKKAYVQQLE TSRIRLQQVE HELQRARSQV CCSPNSETPS  300
DDRLIMHWMR VRIVQSLICH GIAVVQGLFV GGCSAGGDMS SGAAMFDMEY ARWLDDDSKQ  360
LAELRGGLQA HLLDGNLGLI VDECMQHYDE LFQLKAALAR ADVFHLLTGS WATPAERCFF  420
WMGGFRPSEL LKILIPQLDP LTEQQLLGIC NLQQSSEQAE EALAQGLHQL HQSLADTVAA  480
GTLNDGAAAP NYMSLMAVAL EKLASLESFY QQADNLRQQT LHQMRRILTT RQAARCFLSI  540
GEYYRRLRAL SNLWASRPRD DFIGTESLSP TATELQVMHQ QQQNHFSGF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF0369490.0AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001104893.10.0liguleless 2
SwissprotQ415581e-109HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLO490670.0O49067_MAIZE; Basic leucine zipper protein
STRINGGRMZM2G060216_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-137bZIP family protein